Namespace: IO

Kekule. IO

Name space for IO package of Kekule.
Source:

Classes

BaseMdlReader
BaseMdlWriter
ChemDataReader
ChemDataReader
ChemDataReaderManager
ChemDataType
ChemDataWriter
ChemDataWriter
ChemDataWriterManager
CmlChemStructureReader
CmlChemStructureReader
CmlDomUtils
CmlElementHandler
CmlElementReader
CmlElementReaderFactory
CmlElementWriter
CmlElementWriterFactory
CmlFormulaReader
CmlFormulaWriter
CmlListReader
CmlListWriter
CmlMetaDataListReader
CmlMetaDataReader
CmlMoleculeReader
CmlMoleculeReader
CmlMoleculeWriter
CmlNameReader
CmlNameReader
CmlReactionReader
CmlReactionReagentReader
CmlReactionWriter
CmlReader
CmlRootReader
CmlRootWriter
CmlScalarReader
CmlScalarWriter
CmlUtils
CmlWriter
DataFormat
DataFormatsManager
KcjReader
KcjWriter
KcxReader
KcxWriter
MDL
Mdl2kCTabWriter
Mdl3kCTabWriter
Mdl3kMoleculeCTabWriter
MdlBlockHandler
MdlBlockReader
MdlBlockWriter
MdlMoleculeReader
MdlMoleculeWriter
MdlMolReader
MdlMolWriter
MdlReactionReader
MdlReactionWriter
MdlReader
MdlRxnReader
MdlRxnWriter
MdlSdReader
MdlSdWriter
MdlStructDataWriter
MdlStructDataWriter
MdlStructureFragmentReader
MdlStructureFragmentWriter
MdlUtils
MdlWriter
MimeType
SMILES
SmilesMolWriter
SmilesUtils

Members

(static) MdlVersion

Enumeration of MDL MOL/RXN file versions.
Properties:
Name Type Description
V2000
V3000
Source:

Methods

(static) loadFileData(file, callback, formatId, options)

Load chem object from a File object. Note this function relies on FileApi support.
Parameters:
Name Type Description
file File
callback function Callback function when the file is loaded. Has two params (chemObj, success).
formatId String If not set, format will be get from file name automatically.
options Hash Additional options to read data. Different data format may have different options.
Source:

(static) loadFormatData(content, formatId, options) → {Kekule.ChemObject}

Load from content with certain format.
Parameters:
Name Type Description
content String
formatId String
options Hash Additional options to read data. Different data format may have different options.
Source:
Returns:
Type
Kekule.ChemObject

(static) loadMimeData(content, mimeType, options) → {Kekule.ChemObject}

Load from content with mimeType and create a new chem object.
Parameters:
Name Type Description
content String
mimeType String
options Hash Additional options to read data. Different data format may have different options.
Source:
Returns:
Type
Kekule.ChemObject

(static) loadTypedData(content, mimeType, url, options) → {Kekule.ChemObject}

Load a typed content and create a new chem object, the type is recognized by mimeType or the file extension.
Parameters:
Name Type Description
content String
mimeType String
url String
options Hash Additional options to read data. Different data format may have different options.
Source:
Returns:
Type
Kekule.ChemObject

(static) loadUrlData(fileUrl, callback, formatId, options)

Load chem object from a URL. Note this function relies on AJAX support.
Parameters:
Name Type Description
fileUrl String
callback function Callback function when the file is loaded. Has two params (chemObj, success).
formatId String If not set, format will be get from file name automatically.
options Hash Additional options to read data. Different data format may have different options.
Source:

(static) saveFormatData(content, formatId, options) → {Kekule.ChemObject}

Save chemObj with certain format.
Parameters:
Name Type Description
content String
formatId String
options Hash Additional options to save data. Different data format may have different options.
Source:
Returns:
Type
Kekule.ChemObject

(static) saveMimeData(chemObj, mimeType, options) → {String}

Save chemObj to string of mimeType.
Parameters:
Name Type Description
chemObj Kekule.ChemObject
mimeType String
options Hash Additional options to save data. Different data format may have different options.
Source:
Returns:
Type
String

(static) saveTypedData(chemObj, mimeType, urlOrFileExt, options) → {Variant}

Save chem object to a typed content. The type is recognized by mimeType or the file extension.
Parameters:
Name Type Description
chemObj Kekule.ChemObj
mimeType String
urlOrFileExt String URL or file ext.
options Hash Additional options to save data. Different data format may have different options.
Source:
Returns:
Type
Variant